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1

Leveraging long read sequencing from a single individual to provide a comprehensive resource for benchmarking variant calling methods

Mu, John C., Tootoonchi Afshar, Pegah, Mohiyuddin, Marghoob, Chen, Xi, Li, Jian, Bani Asadi, Narges, Gerstein, Mark B., Wong, Wing H., Lam, Hugo Y. K.

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 570 KB

english, 2015

2

[ACM Press the 16th international ACM/SIGDA symposium - Monterey, California, USA (2008.02.24-2008.02.26)] Proceedings of the 16th international ACM/SIGDA symposium on Field programmable gate arrays - FPGA '08 - Reconfigurable computing for learning Bayesian networks

Asadi, Narges Bani, Meng, Teresa H., Wong, Wing H.

Year:

2008

Language:

english

File:

PDF, 911 KB

english, 2008

3

An ensemble approach to accurately detect somatic mutations using SomaticSeq

Fang, Li Tai, Afshar, Pegah Tootoonchi, Chhibber, Aparna, Mohiyuddin, Marghoob, Fan, Yu, Mu, John C., Gibeling, Greg, Barr, Sharon, Asadi, Narges Bani, Gerstein, Mark B., Koboldt, Daniel C., Wang, Wen

Journal:

Year:

2015

Language:

english

File:

PDF, 1.15 MB

english, 2015

4

Inside Genomics: Q&A : Brian Haas of the Broad Institute

Asadi, Narges Bani

Journal:

Year:

2014

Language:

english

File:

PDF, 277 KB

english, 2014

5

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

Sahraeian, Sayed Mohammad Ebrahim, Mohiyuddin, Marghoob, Sebra, Robert, Tilgner, Hagen, Afshar, Pegah T., Au, Kin Fai, Bani Asadi, Narges, Gerstein, Mark B., Wong, Wing Hung, Snyder, Michael P., Schad

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1.35 MB

english, 2017

6

Gene expression profiles of human inner cell mass cells and embryonic stem cells

Renee A. Reijo Pera, Christopher DeJonge, Nancy Bossert, Mylene Yao, Jean Yee Hwa Yang, Narges Bani Asadi, Wing Wong, Connie Wong, Meri T Firpo

Journal:

Differentiation

Year:

2009

Language:

english

File:

PDF, 466 KB

english, 2009

7

LongISLND: In silico Sequencing of Lengthy and Noisy Datatypes

Lau, Bayo, Mohiyuddin, Marghoob, Mu, John C., Fang, Li Tai, Bani Asadi, Narges, Dallett, Carolina, Lam, Hugo Y. K.

Journal:

Year:

2016

Language:

english

File:

PDF, 393 KB

english, 2016

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